Quantitative genetics
1
Genetic constitution of a population
2
Linkage disequilibrium
2.1
Introduction
2.2
Getting started
2.3
Development of the populations
2.4
Un-linked loci
2.5
Closely linked loci
2.6
Conclusion
3
Random drift in the idealized population
3.1
Introduction
3.2
Flexible parameters
3.3
Making a For Loop
3.4
Plotting the results
3.5
Conclusion
4
Systems of close inbreeding
4.1
Introduction
4.2
Through the recurrence equation
4.3
Through coancestry
4.3.1
Develop a pedigree and kinship matrix
4.3.2
Merge the pedigree and kinship matrix
4.3.3
Compare with the recurrence equation
4.4
Conclusion
5
Change of base
5.1
Introduction
5.2
Development of the base population
5.3
Breed from A-to-B & from B-to-X
5.4
Get the complete A-to-X pedigree
5.5
Calculate inbreeding for A-to-B & B-to-X
5.6
Mathematical change of base population
5.7
Confirm the derived result with actual results
5.8
Conclusion
Published with bookdown
A laboratory manual for quantitative genetics
A laboratory manual for quantitative genetics
James Webb, PhD
2024-03-05
Chapter 1
Genetic constitution of a population